Class BaseFeature

Base class that represents a row from the 'feature' table.

BaseObject

cli_db\propel\om\BaseFeature implements Persistent

Direct known subclasses

Abstract
Namespace: cli_db\propel\om
Package: propel\generator\cli\db\om
Located at src/cli/db/propel-classes/cli_db/om/BaseFeature.php

Methods summary
`public`	# `applyDefaultValues( )` Applies default values to this object. This method should be called from the object's constructor (or equivalent initialization method). Applies default values to this object. This method should be called from the object's constructor (or equivalent initialization method). See `cli_db\propel\om\BaseFeature::__construct()`
`public`	# `__construct( )` Initializes internal state of BaseFeature object. Initializes internal state of BaseFeature object. See applyDefaults()
`public integer`	# `getFeatureId( )` Get the [feature_id] column value. Get the [feature_id] column value. Returns `integer`
`public integer`	# `getDbxrefId( )` Get the [dbxref_id] column value. Get the [dbxref_id] column value. Returns `integer`
`public integer`	# `getOrganismId( )` Get the [organism_id] column value. Get the [organism_id] column value. Returns `integer`
`public string`	# `getName( )` Get the [name] column value. Get the [name] column value. Returns `string`
`public string`	# `getUniquename( )` Get the [uniquename] column value. Get the [uniquename] column value. Returns `string`
`public string`	# `getResidues( )` Get the [residues] column value. Get the [residues] column value. Returns `string`
`public integer`	# `getSeqlen( )` Get the [seqlen] column value. Get the [seqlen] column value. Returns `integer`
`public string`	# `getMd5checksum( )` Get the [md5checksum] column value. Get the [md5checksum] column value. Returns `string`
`public integer`	# `getTypeId( )` Get the [type_id] column value. Get the [type_id] column value. Returns `integer`
`public boolean`	# `getIsAnalysis( )` Get the [is_analysis] column value. Get the [is_analysis] column value. Returns `boolean`
`public boolean`	# `getIsObsolete( )` Get the [is_obsolete] column value. Get the [is_obsolete] column value. Returns `boolean`
`public mixed`	# `getTimeaccessioned( string $format = 'Y-m-d H:i:s' )` Get the [optionally formatted] temporal [timeaccessioned] column value. Get the [optionally formatted] temporal [timeaccessioned] column value. Parameters `$format` `string` $format The date/time format string (either date()-style or strftime()-style). If format is null, then the raw DateTime object will be returned. Returns `mixed` Formatted date/time value as string or DateTime object (if format is null), null if column is null Throws `PropelException` - if unable to parse/validate the date/time value.
`public mixed`	# `getTimelastmodified( string $format = 'Y-m-d H:i:s' )` Get the [optionally formatted] temporal [timelastmodified] column value. Get the [optionally formatted] temporal [timelastmodified] column value. Parameters `$format` `string` $format The date/time format string (either date()-style or strftime()-style). If format is null, then the raw DateTime object will be returned. Returns `mixed` Formatted date/time value as string or DateTime object (if format is null), null if column is null Throws `PropelException` - if unable to parse/validate the date/time value.
`public cli_db\propel\Feature`	# `setFeatureId( integer $v )` Set the value of [feature_id] column. Set the value of [feature_id] column. Parameters `$v` `integer` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setDbxrefId( integer $v )` Set the value of [dbxref_id] column. Set the value of [dbxref_id] column. Parameters `$v` `integer` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setOrganismId( integer $v )` Set the value of [organism_id] column. Set the value of [organism_id] column. Parameters `$v` `integer` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setName( string $v )` Set the value of [name] column. Set the value of [name] column. Parameters `$v` `string` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setUniquename( string $v )` Set the value of [uniquename] column. Set the value of [uniquename] column. Parameters `$v` `string` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setResidues( string $v )` Set the value of [residues] column. Set the value of [residues] column. Parameters `$v` `string` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setSeqlen( integer $v )` Set the value of [seqlen] column. Set the value of [seqlen] column. Parameters `$v` `integer` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setMd5checksum( string $v )` Set the value of [md5checksum] column. Set the value of [md5checksum] column. Parameters `$v` `string` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setTypeId( integer $v )` Set the value of [type_id] column. Set the value of [type_id] column. Parameters `$v` `integer` $v new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setIsAnalysis( boolean\|integer\|string $v )` Sets the value of the [is_analysis] column. Non-boolean arguments are converted using the following rules: * 1, '1', 'true', 'on', and 'yes' are converted to boolean true * 0, '0', 'false', 'off', and 'no' are converted to boolean false Check on string values is case insensitive (so 'FaLsE' is seen as 'false'). Sets the value of the [is_analysis] column. Non-boolean arguments are converted using the following rules: * 1, '1', 'true', 'on', and 'yes' are converted to boolean true * 0, '0', 'false', 'off', and 'no' are converted to boolean false Check on string values is case insensitive (so 'FaLsE' is seen as 'false'). Parameters `$v` `boolean\|integer\|string` $v The new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setIsObsolete( boolean\|integer\|string $v )` Sets the value of the [is_obsolete] column. Non-boolean arguments are converted using the following rules: * 1, '1', 'true', 'on', and 'yes' are converted to boolean true * 0, '0', 'false', 'off', and 'no' are converted to boolean false Check on string values is case insensitive (so 'FaLsE' is seen as 'false'). Sets the value of the [is_obsolete] column. Non-boolean arguments are converted using the following rules: * 1, '1', 'true', 'on', and 'yes' are converted to boolean true * 0, '0', 'false', 'off', and 'no' are converted to boolean false Check on string values is case insensitive (so 'FaLsE' is seen as 'false'). Parameters `$v` `boolean\|integer\|string` $v The new value Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setTimeaccessioned( mixed $v )` Sets the value of [timeaccessioned] column to a normalized version of the date/time value specified. Sets the value of [timeaccessioned] column to a normalized version of the date/time value specified. Parameters `$v` `mixed` $v string, integer (timestamp), or DateTime value. Empty strings are treated as null. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public cli_db\propel\Feature`	# `setTimelastmodified( mixed $v )` Sets the value of [timelastmodified] column to a normalized version of the date/time value specified. Sets the value of [timelastmodified] column to a normalized version of the date/time value specified. Parameters `$v` `mixed` $v string, integer (timestamp), or DateTime value. Empty strings are treated as null. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public boolean`	# `hasOnlyDefaultValues( )` Indicates whether the columns in this object are only set to default values. Indicates whether the columns in this object are only set to default values. This method can be used in conjunction with isModified() to indicate whether an object is both modified _and_ has some values set which are non-default. Returns `boolean` Whether the columns in this object are only been set with default values.
`public integer`	# `hydrate( array $row, integer $startcol = 0, boolean $rehydrate = false )` Hydrates (populates) the object variables with values from the database resultset. Hydrates (populates) the object variables with values from the database resultset. An offset (0-based "start column") is specified so that objects can be hydrated with a subset of the columns in the resultset rows. This is needed, for example, for results of JOIN queries where the resultset row includes columns from two or more tables. Parameters `$row` `array` $row The row returned by PDOStatement->fetch(PDO::FETCH_NUM) `$startcol` `integer` $startcol 0-based offset column which indicates which restultset column to start with. `$rehydrate` `boolean` $rehydrate Whether this object is being re-hydrated from the database. Returns `integer` next starting column Throws `PropelException` - Any caught Exception will be rewrapped as a PropelException.
`public`	# `ensureConsistency( )` Checks and repairs the internal consistency of the object. Checks and repairs the internal consistency of the object. This method is executed after an already-instantiated object is re-hydrated from the database. It exists to check any foreign keys to make sure that the objects related to the current object are correct based on foreign key. You can override this method in the stub class, but you should always invoke the base method from the overridden method (i.e. parent::ensureConsistency()), in case your model changes. Throws `PropelException`
`public`	# `reload( boolean $deep = false, PropelPDO $con = null )` Reloads this object from datastore based on primary key and (optionally) resets all associated objects. Reloads this object from datastore based on primary key and (optionally) resets all associated objects. This will only work if the object has been saved and has a valid primary key set. Parameters `$deep` `boolean` $deep (optional) Whether to also de-associated any related objects. `$con` `PropelPDO` $con (optional) The PropelPDO connection to use. Throws `PropelException` - if this object is deleted, unsaved or doesn't have pk match in db
`public`	# `delete( PropelPDO $con = null )` Removes this object from datastore and sets delete attribute. Removes this object from datastore and sets delete attribute. Parameters `$con` `PropelPDO` $con Throws `PropelException` `Exception` See BaseObject::setDeleted() BaseObject::isDeleted()
`public integer`	# `save( PropelPDO $con = null )` Persists this object to the database. Persists this object to the database. If the object is new, it inserts it; otherwise an update is performed. All modified related objects will also be persisted in the doSave() method. This method wraps all precipitate database operations in a single transaction. Parameters `$con` `PropelPDO` $con Returns `integer` The number of rows affected by this insert/update and any referring fk objects' save() operations. Throws `PropelException` `Exception` See `cli_db\propel\om\BaseFeature::doSave()`
`protected integer`	# `doSave( PropelPDO $con )` Performs the work of inserting or updating the row in the database. Performs the work of inserting or updating the row in the database. If the object is new, it inserts it; otherwise an update is performed. All related objects are also updated in this method. Parameters `$con` `PropelPDO` $con Returns `integer` The number of rows affected by this insert/update and any referring fk objects' save() operations. Throws `PropelException` See `cli_db\propel\om\BaseFeature::save()`
`protected`	# `doInsert( PropelPDO $con )` Insert the row in the database. Insert the row in the database. Parameters `$con` `PropelPDO` $con Throws `PropelException` See `cli_db\propel\om\BaseFeature::doSave()`
`protected`	# `doUpdate( PropelPDO $con )` Update the row in the database. Update the row in the database. Parameters `$con` `PropelPDO` $con See `cli_db\propel\om\BaseFeature::doSave()`
`public array`	# `getValidationFailures( )` Gets any ValidationFailed objects that resulted from last call to validate(). Gets any ValidationFailed objects that resulted from last call to validate(). Returns `array` ValidationFailed[] See `cli_db\propel\om\BaseFeature::validate()`
`public boolean`	# `validate( mixed $columns = null )` Validates the objects modified field values and all objects related to this table. Validates the objects modified field values and all objects related to this table. If $columns is either a column name or an array of column names only those columns are validated. Parameters `$columns` `mixed` $columns Column name or an array of column names. Returns `boolean` Whether all columns pass validation. See `cli_db\propel\om\BaseFeature::doValidate()` `cli_db\propel\om\BaseFeature::getValidationFailures()`
`protected mixed`	# `doValidate( array $columns = null )` This function performs the validation work for complex object models. This function performs the validation work for complex object models. In addition to checking the current object, all related objects will also be validated. If all pass then `<span class="php-keyword1">true</span>` is returned; otherwise an aggreagated array of ValidationFailed objects will be returned. Parameters `$columns` `array` $columns Array of column names to validate. Returns `mixed` `<span class="php-keyword1">true</span>` if all validations pass; array of `ValidationFailed` objets otherwise.
`public mixed`	# `getByName( string $name, string $type = cli_db\propel\om\BasePeer::TYPE_PHPNAME )` Retrieves a field from the object by name passed in as a string. Retrieves a field from the object by name passed in as a string. Parameters `$name` `string` $name name `$type` `string` $type The type of fieldname the $name is of: one of the class type constants BasePeer::TYPE_PHPNAME, BasePeer::TYPE_STUDLYPHPNAME BasePeer::TYPE_COLNAME, BasePeer::TYPE_FIELDNAME, BasePeer::TYPE_NUM. Defaults to BasePeer::TYPE_PHPNAME Returns `mixed` Value of field.
`public mixed`	# `getByPosition( integer $pos )` Retrieves a field from the object by Position as specified in the xml schema. Zero-based. Retrieves a field from the object by Position as specified in the xml schema. Zero-based. Parameters `$pos` `integer` $pos position in xml schema Returns `mixed` Value of field at $pos
`public array`	# `toArray( string $keyType = cli_db\propel\om\BasePeer::TYPE_PHPNAME, boolean $includeLazyLoadColumns = true, array $alreadyDumpedObjects = array(), boolean $includeForeignObjects = false )` Exports the object as an array. Exports the object as an array. You can specify the key type of the array by passing one of the class type constants. Parameters `$keyType` `string` $keyType (optional) One of the class type constants BasePeer::TYPE_PHPNAME, BasePeer::TYPE_STUDLYPHPNAME, BasePeer::TYPE_COLNAME, BasePeer::TYPE_FIELDNAME, BasePeer::TYPE_NUM. Defaults to BasePeer::TYPE_PHPNAME. `$includeLazyLoadColumns` `boolean` $includeLazyLoadColumns (optional) Whether to include lazy loaded columns. Defaults to true. `$alreadyDumpedObjects` `array` $alreadyDumpedObjects List of objects to skip to avoid recursion `$includeForeignObjects` `boolean` $includeForeignObjects (optional) Whether to include hydrated related objects. Default to FALSE. Returns `array` an associative array containing the field names (as keys) and field values
`public`	# `setByName( string $name, mixed $value, string $type = cli_db\propel\om\BasePeer::TYPE_PHPNAME )` Sets a field from the object by name passed in as a string. Sets a field from the object by name passed in as a string. Parameters `$name` `string` $name peer name `$value` `mixed` $value field value `$type` `string` $type The type of fieldname the $name is of: one of the class type constants BasePeer::TYPE_PHPNAME, BasePeer::TYPE_STUDLYPHPNAME BasePeer::TYPE_COLNAME, BasePeer::TYPE_FIELDNAME, BasePeer::TYPE_NUM. Defaults to BasePeer::TYPE_PHPNAME
`public`	# `setByPosition( integer $pos, mixed $value )` Sets a field from the object by Position as specified in the xml schema. Zero-based. Sets a field from the object by Position as specified in the xml schema. Zero-based. Parameters `$pos` `integer` $pos position in xml schema `$value` `mixed` $value field value
`public`	# `fromArray( array $arr, string $keyType = cli_db\propel\om\BasePeer::TYPE_PHPNAME )` Populates the object using an array. Populates the object using an array. This is particularly useful when populating an object from one of the request arrays (e.g. $_POST). This method goes through the column names, checking to see whether a matching key exists in populated array. If so the setByName() method is called for that column. You can specify the key type of the array by additionally passing one of the class type constants BasePeer::TYPE_PHPNAME, BasePeer::TYPE_STUDLYPHPNAME, BasePeer::TYPE_COLNAME, BasePeer::TYPE_FIELDNAME, BasePeer::TYPE_NUM. The default key type is the column's BasePeer::TYPE_PHPNAME Parameters `$arr` `array` $arr An array to populate the object from. `$keyType` `string` $keyType The type of keys the array uses.
`public Criteria`	# `buildCriteria( )` Build a Criteria object containing the values of all modified columns in this object. Build a Criteria object containing the values of all modified columns in this object. Returns `Criteria` The Criteria object containing all modified values.
`public Criteria`	# `buildPkeyCriteria( )` Builds a Criteria object containing the primary key for this object. Builds a Criteria object containing the primary key for this object. Unlike buildCriteria() this method includes the primary key values regardless of whether or not they have been modified. Returns `Criteria` The Criteria object containing value(s) for primary key(s).
`public integer`	# `getPrimaryKey( )` Returns the primary key for this object (row). Returns the primary key for this object (row). Returns `integer`
`public`	# `setPrimaryKey( integer $key )` Generic method to set the primary key (feature_id column). Generic method to set the primary key (feature_id column). Parameters `$key` `integer` $key Primary key.
`public boolean`	# `isPrimaryKeyNull( )` Returns true if the primary key for this object is null. Returns true if the primary key for this object is null. Returns `boolean`
`public`	# `copyInto( object $copyObj, boolean $deepCopy = false, boolean $makeNew = true )` Sets contents of passed object to values from current object. Sets contents of passed object to values from current object. If desired, this method can also make copies of all associated (fkey referrers) objects. Parameters `$copyObj` `object` $copyObj An object of Feature (or compatible) type. `$deepCopy` `boolean` $deepCopy Whether to also copy all rows that refer (by fkey) to the current row. `$makeNew` `boolean` $makeNew Whether to reset autoincrement PKs and make the object new. Throws `PropelException`
`public cli_db\propel\Feature`	# `copy( boolean $deepCopy = false )` Makes a copy of this object that will be inserted as a new row in table when saved. It creates a new object filling in the simple attributes, but skipping any primary keys that are defined for the table. Makes a copy of this object that will be inserted as a new row in table when saved. It creates a new object filling in the simple attributes, but skipping any primary keys that are defined for the table. If desired, this method can also make copies of all associated (fkey referrers) objects. Parameters `$deepCopy` `boolean` $deepCopy Whether to also copy all rows that refer (by fkey) to the current row. Returns `cli_db\propel\Feature` Clone of current object. Throws `PropelException`
`public cli_db\propel\FeaturePeer`	# `getPeer( )` Returns a peer instance associated with this om. Returns a peer instance associated with this om. Since Peer classes are not to have any instance attributes, this method returns the same instance for all member of this class. The method could therefore be static, but this would prevent one from overriding the behavior. Returns `cli_db\propel\FeaturePeer`
`public cli_db\propel\Feature`	# `setDbxref( cli_db\propel\Dbxref $v = null )` Declares an association between this object and a Dbxref object. Declares an association between this object and a Dbxref object. Parameters `$v` `cli_db\propel\Dbxref` $v Returns `cli_db\propel\Feature` The current object (for fluent API support) Throws `PropelException`
`public cli_db\propel\Dbxref`	# `getDbxref( PropelPDO $con = null, mixed $doQuery = true )` Get the associated Dbxref object Get the associated Dbxref object Parameters `$con` `PropelPDO` $con Optional Connection object. `$doQuery` `mixed` $doQuery Executes a query to get the object if required Returns `cli_db\propel\Dbxref` The associated Dbxref object. Throws `PropelException`
`public cli_db\propel\Feature`	# `setOrganism( cli_db\propel\Organism $v = null )` Declares an association between this object and a Organism object. Declares an association between this object and a Organism object. Parameters `$v` `cli_db\propel\Organism` $v Returns `cli_db\propel\Feature` The current object (for fluent API support) Throws `PropelException`
`public cli_db\propel\Organism`	# `getOrganism( PropelPDO $con = null, mixed $doQuery = true )` Get the associated Organism object Get the associated Organism object Parameters `$con` `PropelPDO` $con Optional Connection object. `$doQuery` `mixed` $doQuery Executes a query to get the object if required Returns `cli_db\propel\Organism` The associated Organism object. Throws `PropelException`
`public cli_db\propel\Feature`	# `setCvterm( cli_db\propel\Cvterm $v = null )` Declares an association between this object and a Cvterm object. Declares an association between this object and a Cvterm object. Parameters `$v` `cli_db\propel\Cvterm` $v Returns `cli_db\propel\Feature` The current object (for fluent API support) Throws `PropelException`
`public cli_db\propel\Cvterm`	# `getCvterm( PropelPDO $con = null, mixed $doQuery = true )` Get the associated Cvterm object Get the associated Cvterm object Parameters `$con` `PropelPDO` $con Optional Connection object. `$doQuery` `mixed` $doQuery Executes a query to get the object if required Returns `cli_db\propel\Cvterm` The associated Cvterm object. Throws `PropelException`
`public`	# `initRelation( string $relationName )` Initializes a collection based on the name of a relation. Avoids crafting an 'init[$relationName]s' method name that wouldn't work when StandardEnglishPluralizer is used. Initializes a collection based on the name of a relation. Avoids crafting an 'init[$relationName]s' method name that wouldn't work when StandardEnglishPluralizer is used. Parameters `$relationName` `string` $relationName The name of the relation to initialize
`public cli_db\propel\Feature`	# `clearFeatureCvterms( )` Clears out the collFeatureCvterms collection Clears out the collFeatureCvterms collection This does not modify the database; however, it will remove any associated objects, causing them to be refetched by subsequent calls to accessor method. Returns `cli_db\propel\Feature` The current object (for fluent API support) See addFeatureCvterms()
`public`	# `resetPartialFeatureCvterms( mixed $v = true )` reset is the collFeatureCvterms collection loaded partially reset is the collFeatureCvterms collection loaded partially
`public`	# `initFeatureCvterms( boolean $overrideExisting = true )` Initializes the collFeatureCvterms collection. Initializes the collFeatureCvterms collection. By default this just sets the collFeatureCvterms collection to an empty array (like clearcollFeatureCvterms()); however, you may wish to override this method in your stub class to provide setting appropriate to your application -- for example, setting the initial array to the values stored in database. Parameters `$overrideExisting` `boolean` $overrideExisting If set to true, the method call initializes the collection even if it is not empty
`public PropelObjectCollection\|cli_db\propel\FeatureCvterm[]`	# `getFeatureCvterms( Criteria $criteria = null, PropelPDO $con = null )` Gets an array of FeatureCvterm objects which contain a foreign key that references this object. Gets an array of FeatureCvterm objects which contain a foreign key that references this object. If the $criteria is not null, it is used to always fetch the results from the database. Otherwise the results are fetched from the database the first time, then cached. Next time the same method is called without $criteria, the cached collection is returned. If this Feature is new, it will return an empty collection or the current collection; the criteria is ignored on a new object. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object Returns `PropelObjectCollection\|cli_db\propel\FeatureCvterm[]` List of FeatureCvterm objects Throws `PropelException`
`public cli_db\propel\Feature`	# `setFeatureCvterms( PropelCollection $featureCvterms, PropelPDO $con = null )` Sets a collection of FeatureCvterm objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Sets a collection of FeatureCvterm objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Parameters `$featureCvterms` `PropelCollection` $featureCvterms A Propel collection. `$con` `PropelPDO` $con Optional connection object Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public integer`	# `countFeatureCvterms( Criteria $criteria = null, boolean $distinct = false, PropelPDO $con = null )` Returns the number of related FeatureCvterm objects. Returns the number of related FeatureCvterm objects. Parameters `$criteria` `Criteria` $criteria `$distinct` `boolean` $distinct `$con` `PropelPDO` $con Returns `integer` Count of related FeatureCvterm objects. Throws `PropelException`
`public cli_db\propel\Feature`	# `addFeatureCvterm( cli_db\propel\FeatureCvterm $l )` Method called to associate a FeatureCvterm object to this object through the FeatureCvterm foreign key attribute. Method called to associate a FeatureCvterm object to this object through the FeatureCvterm foreign key attribute. Parameters `$l` `cli_db\propel\FeatureCvterm` $l FeatureCvterm Returns `cli_db\propel\Feature` The current object (for fluent API support)
`protected`	# `doAddFeatureCvterm( cli_db\propel\FeatureCvterm $featureCvterm )` Parameters `$featureCvterm` `cli_db\propel\FeatureCvterm` $featureCvterm The featureCvterm object to add.
`public cli_db\propel\Feature`	# `removeFeatureCvterm( cli_db\propel\FeatureCvterm $featureCvterm )` Parameters `$featureCvterm` `cli_db\propel\FeatureCvterm` $featureCvterm The featureCvterm object to remove. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public PropelObjectCollection\|cli_db\propel\FeatureCvterm[]`	# `getFeatureCvtermsJoinCvterm( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureCvterms from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureCvterms from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeatureCvterm[]` List of FeatureCvterm objects
`public PropelObjectCollection\|cli_db\propel\FeatureCvterm[]`	# `getFeatureCvtermsJoinPub( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureCvterms from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureCvterms from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeatureCvterm[]` List of FeatureCvterm objects
`public cli_db\propel\Feature`	# `clearFeatureDbxrefs( )` Clears out the collFeatureDbxrefs collection Clears out the collFeatureDbxrefs collection This does not modify the database; however, it will remove any associated objects, causing them to be refetched by subsequent calls to accessor method. Returns `cli_db\propel\Feature` The current object (for fluent API support) See addFeatureDbxrefs()
`public`	# `resetPartialFeatureDbxrefs( mixed $v = true )` reset is the collFeatureDbxrefs collection loaded partially reset is the collFeatureDbxrefs collection loaded partially
`public`	# `initFeatureDbxrefs( boolean $overrideExisting = true )` Initializes the collFeatureDbxrefs collection. Initializes the collFeatureDbxrefs collection. By default this just sets the collFeatureDbxrefs collection to an empty array (like clearcollFeatureDbxrefs()); however, you may wish to override this method in your stub class to provide setting appropriate to your application -- for example, setting the initial array to the values stored in database. Parameters `$overrideExisting` `boolean` $overrideExisting If set to true, the method call initializes the collection even if it is not empty
`public PropelObjectCollection\|cli_db\propel\FeatureDbxref[]`	# `getFeatureDbxrefs( Criteria $criteria = null, PropelPDO $con = null )` Gets an array of FeatureDbxref objects which contain a foreign key that references this object. Gets an array of FeatureDbxref objects which contain a foreign key that references this object. If the $criteria is not null, it is used to always fetch the results from the database. Otherwise the results are fetched from the database the first time, then cached. Next time the same method is called without $criteria, the cached collection is returned. If this Feature is new, it will return an empty collection or the current collection; the criteria is ignored on a new object. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object Returns `PropelObjectCollection\|cli_db\propel\FeatureDbxref[]` List of FeatureDbxref objects Throws `PropelException`
`public cli_db\propel\Feature`	# `setFeatureDbxrefs( PropelCollection $featureDbxrefs, PropelPDO $con = null )` Sets a collection of FeatureDbxref objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Sets a collection of FeatureDbxref objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Parameters `$featureDbxrefs` `PropelCollection` $featureDbxrefs A Propel collection. `$con` `PropelPDO` $con Optional connection object Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public integer`	# `countFeatureDbxrefs( Criteria $criteria = null, boolean $distinct = false, PropelPDO $con = null )` Returns the number of related FeatureDbxref objects. Returns the number of related FeatureDbxref objects. Parameters `$criteria` `Criteria` $criteria `$distinct` `boolean` $distinct `$con` `PropelPDO` $con Returns `integer` Count of related FeatureDbxref objects. Throws `PropelException`
`public cli_db\propel\Feature`	# `addFeatureDbxref( cli_db\propel\FeatureDbxref $l )` Method called to associate a FeatureDbxref object to this object through the FeatureDbxref foreign key attribute. Method called to associate a FeatureDbxref object to this object through the FeatureDbxref foreign key attribute. Parameters `$l` `cli_db\propel\FeatureDbxref` $l FeatureDbxref Returns `cli_db\propel\Feature` The current object (for fluent API support)
`protected`	# `doAddFeatureDbxref( cli_db\propel\FeatureDbxref $featureDbxref )` Parameters `$featureDbxref` `cli_db\propel\FeatureDbxref` $featureDbxref The featureDbxref object to add.
`public cli_db\propel\Feature`	# `removeFeatureDbxref( cli_db\propel\FeatureDbxref $featureDbxref )` Parameters `$featureDbxref` `cli_db\propel\FeatureDbxref` $featureDbxref The featureDbxref object to remove. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public PropelObjectCollection\|cli_db\propel\FeatureDbxref[]`	# `getFeatureDbxrefsJoinDbxref( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureDbxrefs from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureDbxrefs from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeatureDbxref[]` List of FeatureDbxref objects
`public cli_db\propel\Feature`	# `clearFeaturePubs( )` Clears out the collFeaturePubs collection Clears out the collFeaturePubs collection This does not modify the database; however, it will remove any associated objects, causing them to be refetched by subsequent calls to accessor method. Returns `cli_db\propel\Feature` The current object (for fluent API support) See addFeaturePubs()
`public`	# `resetPartialFeaturePubs( mixed $v = true )` reset is the collFeaturePubs collection loaded partially reset is the collFeaturePubs collection loaded partially
`public`	# `initFeaturePubs( boolean $overrideExisting = true )` Initializes the collFeaturePubs collection. Initializes the collFeaturePubs collection. By default this just sets the collFeaturePubs collection to an empty array (like clearcollFeaturePubs()); however, you may wish to override this method in your stub class to provide setting appropriate to your application -- for example, setting the initial array to the values stored in database. Parameters `$overrideExisting` `boolean` $overrideExisting If set to true, the method call initializes the collection even if it is not empty
`public PropelObjectCollection\|cli_db\propel\FeaturePub[]`	# `getFeaturePubs( Criteria $criteria = null, PropelPDO $con = null )` Gets an array of FeaturePub objects which contain a foreign key that references this object. Gets an array of FeaturePub objects which contain a foreign key that references this object. If the $criteria is not null, it is used to always fetch the results from the database. Otherwise the results are fetched from the database the first time, then cached. Next time the same method is called without $criteria, the cached collection is returned. If this Feature is new, it will return an empty collection or the current collection; the criteria is ignored on a new object. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object Returns `PropelObjectCollection\|cli_db\propel\FeaturePub[]` List of FeaturePub objects Throws `PropelException`
`public cli_db\propel\Feature`	# `setFeaturePubs( PropelCollection $featurePubs, PropelPDO $con = null )` Sets a collection of FeaturePub objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Sets a collection of FeaturePub objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Parameters `$featurePubs` `PropelCollection` $featurePubs A Propel collection. `$con` `PropelPDO` $con Optional connection object Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public integer`	# `countFeaturePubs( Criteria $criteria = null, boolean $distinct = false, PropelPDO $con = null )` Returns the number of related FeaturePub objects. Returns the number of related FeaturePub objects. Parameters `$criteria` `Criteria` $criteria `$distinct` `boolean` $distinct `$con` `PropelPDO` $con Returns `integer` Count of related FeaturePub objects. Throws `PropelException`
`public cli_db\propel\Feature`	# `addFeaturePub( cli_db\propel\FeaturePub $l )` Method called to associate a FeaturePub object to this object through the FeaturePub foreign key attribute. Method called to associate a FeaturePub object to this object through the FeaturePub foreign key attribute. Parameters `$l` `cli_db\propel\FeaturePub` $l FeaturePub Returns `cli_db\propel\Feature` The current object (for fluent API support)
`protected`	# `doAddFeaturePub( cli_db\propel\FeaturePub $featurePub )` Parameters `$featurePub` `cli_db\propel\FeaturePub` $featurePub The featurePub object to add.
`public cli_db\propel\Feature`	# `removeFeaturePub( cli_db\propel\FeaturePub $featurePub )` Parameters `$featurePub` `cli_db\propel\FeaturePub` $featurePub The featurePub object to remove. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public PropelObjectCollection\|cli_db\propel\FeaturePub[]`	# `getFeaturePubsJoinPub( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeaturePubs from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeaturePubs from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeaturePub[]` List of FeaturePub objects
`public cli_db\propel\Feature`	# `clearFeatureSynonyms( )` Clears out the collFeatureSynonyms collection Clears out the collFeatureSynonyms collection This does not modify the database; however, it will remove any associated objects, causing them to be refetched by subsequent calls to accessor method. Returns `cli_db\propel\Feature` The current object (for fluent API support) See addFeatureSynonyms()
`public`	# `resetPartialFeatureSynonyms( mixed $v = true )` reset is the collFeatureSynonyms collection loaded partially reset is the collFeatureSynonyms collection loaded partially
`public`	# `initFeatureSynonyms( boolean $overrideExisting = true )` Initializes the collFeatureSynonyms collection. Initializes the collFeatureSynonyms collection. By default this just sets the collFeatureSynonyms collection to an empty array (like clearcollFeatureSynonyms()); however, you may wish to override this method in your stub class to provide setting appropriate to your application -- for example, setting the initial array to the values stored in database. Parameters `$overrideExisting` `boolean` $overrideExisting If set to true, the method call initializes the collection even if it is not empty
`public PropelObjectCollection\|cli_db\propel\FeatureSynonym[]`	# `getFeatureSynonyms( Criteria $criteria = null, PropelPDO $con = null )` Gets an array of FeatureSynonym objects which contain a foreign key that references this object. Gets an array of FeatureSynonym objects which contain a foreign key that references this object. If the $criteria is not null, it is used to always fetch the results from the database. Otherwise the results are fetched from the database the first time, then cached. Next time the same method is called without $criteria, the cached collection is returned. If this Feature is new, it will return an empty collection or the current collection; the criteria is ignored on a new object. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object Returns `PropelObjectCollection\|cli_db\propel\FeatureSynonym[]` List of FeatureSynonym objects Throws `PropelException`
`public cli_db\propel\Feature`	# `setFeatureSynonyms( PropelCollection $featureSynonyms, PropelPDO $con = null )` Sets a collection of FeatureSynonym objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Sets a collection of FeatureSynonym objects related by a one-to-many relationship to the current object. It will also schedule objects for deletion based on a diff between old objects (aka persisted) and new objects from the given Propel collection. Parameters `$featureSynonyms` `PropelCollection` $featureSynonyms A Propel collection. `$con` `PropelPDO` $con Optional connection object Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public integer`	# `countFeatureSynonyms( Criteria $criteria = null, boolean $distinct = false, PropelPDO $con = null )` Returns the number of related FeatureSynonym objects. Returns the number of related FeatureSynonym objects. Parameters `$criteria` `Criteria` $criteria `$distinct` `boolean` $distinct `$con` `PropelPDO` $con Returns `integer` Count of related FeatureSynonym objects. Throws `PropelException`
`public cli_db\propel\Feature`	# `addFeatureSynonym( cli_db\propel\FeatureSynonym $l )` Method called to associate a FeatureSynonym object to this object through the FeatureSynonym foreign key attribute. Method called to associate a FeatureSynonym object to this object through the FeatureSynonym foreign key attribute. Parameters `$l` `cli_db\propel\FeatureSynonym` $l FeatureSynonym Returns `cli_db\propel\Feature` The current object (for fluent API support)
`protected`	# `doAddFeatureSynonym( cli_db\propel\FeatureSynonym $featureSynonym )` Parameters `$featureSynonym` `cli_db\propel\FeatureSynonym` $featureSynonym The featureSynonym object to add.
`public cli_db\propel\Feature`	# `removeFeatureSynonym( cli_db\propel\FeatureSynonym $featureSynonym )` Parameters `$featureSynonym` `cli_db\propel\FeatureSynonym` $featureSynonym The featureSynonym object to remove. Returns `cli_db\propel\Feature` The current object (for fluent API support)
`public PropelObjectCollection\|cli_db\propel\FeatureSynonym[]`	# `getFeatureSynonymsJoinPub( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureSynonyms from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureSynonyms from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeatureSynonym[]` List of FeatureSynonym objects
`public PropelObjectCollection\|cli_db\propel\FeatureSynonym[]`	# `getFeatureSynonymsJoinSynonym( Criteria $criteria = null, PropelPDO $con = null, string $join_behavior = cli_db\propel\om\Criteria::LEFT_JOIN )` If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureSynonyms from storage. If this collection has already been initialized with an identical criteria, it returns the collection. Otherwise if this Feature is new, it will return an empty collection; or if this Feature has previously been saved, it will retrieve related FeatureSynonyms from storage. This method is protected by default in order to keep the public api reasonable. You can provide public methods for those you actually need in Feature. Parameters `$criteria` `Criteria` $criteria optional Criteria object to narrow the query `$con` `PropelPDO` $con optional connection object `$join_behavior` `string` $join_behavior optional join type to use (defaults to Criteria::LEFT_JOIN) Returns `PropelObjectCollection\|cli_db\propel\FeatureSynonym[]` List of FeatureSynonym objects
`public`	# `clear( )` Clears the current object and sets all attributes to their default values Clears the current object and sets all attributes to their default values
`public`	# `clearAllReferences( boolean $deep = false )` Resets all references to other model objects or collections of model objects. Resets all references to other model objects or collections of model objects. This method is a user-space workaround for PHP's inability to garbage collect objects with circular references (even in PHP 5.3). This is currently necessary when using Propel in certain daemon or large-volumne/high-memory operations. Parameters `$deep` `boolean` $deep Whether to also clear the references on all referrer objects.
`public string`	# `__toString( )` return the string representation of this object return the string representation of this object Returns `string`
`public boolean`	# `isAlreadyInSave( )` return true is the object is in saving state return true is the object is in saving state Returns `boolean`

Constants summary
`string`	`PEER`	`'cli_db\\propel\\FeaturePeer'`	# Peer class name Peer class name

Properties summary
`protected static cli_db\propel\FeaturePeer`	`$peer`		# The Peer class. Instance provides a convenient way of calling static methods on a class that calling code may not be able to identify. The Peer class. Instance provides a convenient way of calling static methods on a class that calling code may not be able to identify.
`protected boolean`	`$startCopy`	`false`	# The flag var to prevent infinit loop in deep copy The flag var to prevent infinit loop in deep copy
`protected integer`	`$feature_id`		# The value for the feature_id field. The value for the feature_id field.
`protected integer`	`$dbxref_id`		# The value for the dbxref_id field. The value for the dbxref_id field.
`protected integer`	`$organism_id`		# The value for the organism_id field. The value for the organism_id field.
`protected string`	`$name`		# The value for the name field. The value for the name field.
`protected string`	`$uniquename`		# The value for the uniquename field. The value for the uniquename field.
`protected string`	`$residues`		# The value for the residues field. The value for the residues field.
`protected integer`	`$seqlen`		# The value for the seqlen field. The value for the seqlen field.
`protected string`	`$md5checksum`		# The value for the md5checksum field. The value for the md5checksum field.
`protected integer`	`$type_id`		# The value for the type_id field. The value for the type_id field.
`protected boolean`	`$is_analysis`		# The value for the is_analysis field. Note: this column has a database default value of: false The value for the is_analysis field. Note: this column has a database default value of: false
`protected boolean`	`$is_obsolete`		# The value for the is_obsolete field. Note: this column has a database default value of: false The value for the is_obsolete field. Note: this column has a database default value of: false
`protected string`	`$timeaccessioned`		# The value for the timeaccessioned field. Note: this column has a database default value of: (expression) now() The value for the timeaccessioned field. Note: this column has a database default value of: (expression) now()
`protected string`	`$timelastmodified`		# The value for the timelastmodified field. Note: this column has a database default value of: (expression) now() The value for the timelastmodified field. Note: this column has a database default value of: (expression) now()
`protected cli_db\propel\Dbxref`	`$aDbxref`		#
`protected cli_db\propel\Organism`	`$aOrganism`		#
`protected cli_db\propel\Cvterm`	`$aCvterm`		#
`protected PropelObjectCollection\|cli_db\propel\FeatureCvterm[]`	`$collFeatureCvterms`		# Collection to store aggregation of FeatureCvterm objects. Collection to store aggregation of FeatureCvterm objects.
`protected mixed`	`$collFeatureCvtermsPartial`		#
`protected PropelObjectCollection\|cli_db\propel\FeatureDbxref[]`	`$collFeatureDbxrefs`		# Collection to store aggregation of FeatureDbxref objects. Collection to store aggregation of FeatureDbxref objects.
`protected mixed`	`$collFeatureDbxrefsPartial`		#
`protected PropelObjectCollection\|cli_db\propel\FeaturePub[]`	`$collFeaturePubs`		# Collection to store aggregation of FeaturePub objects. Collection to store aggregation of FeaturePub objects.
`protected mixed`	`$collFeaturePubsPartial`		#
`protected PropelObjectCollection\|cli_db\propel\FeatureSynonym[]`	`$collFeatureSynonyms`		# Collection to store aggregation of FeatureSynonym objects. Collection to store aggregation of FeatureSynonym objects.
`protected mixed`	`$collFeatureSynonymsPartial`		#
`protected boolean`	`$alreadyInSave`	`false`	# Flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction. Flag to prevent endless save loop, if this object is referenced by another object which falls in this transaction.
`protected boolean`	`$alreadyInValidation`	`false`	# Flag to prevent endless validation loop, if this object is referenced by another object which falls in this transaction. Flag to prevent endless validation loop, if this object is referenced by another object which falls in this transaction.
`protected boolean`	`$alreadyInClearAllReferencesDeep`	`false`	# Flag to prevent endless clearAllReferences($deep=true) loop, if this object is referenced Flag to prevent endless clearAllReferences($deep=true) loop, if this object is referenced
`protected PropelObjectCollection`	`$featureCvtermsScheduledForDeletion`	`null`	# An array of objects scheduled for deletion. An array of objects scheduled for deletion.
`protected PropelObjectCollection`	`$featureDbxrefsScheduledForDeletion`	`null`	# An array of objects scheduled for deletion. An array of objects scheduled for deletion.
`protected PropelObjectCollection`	`$featurePubsScheduledForDeletion`	`null`	# An array of objects scheduled for deletion. An array of objects scheduled for deletion.
`protected PropelObjectCollection`	`$featureSynonymsScheduledForDeletion`	`null`	# An array of objects scheduled for deletion. An array of objects scheduled for deletion.
`protected array`	`$validationFailures`	`array()`	# Array of ValidationFailed objects. Array of ValidationFailed objects.

Namespaces

Classes

Class BaseFeature

Direct known subclasses

See

See

Returns

Returns

Returns

Returns

Returns

Returns

Returns

Returns

Returns

Returns

Returns

Parameters

Returns

Throws

Parameters

Returns

Throws

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Parameters

Returns

Returns

Parameters

Returns

Throws

Throws

Parameters

Throws

Parameters

Throws

See

Parameters

Returns

Throws

See

Parameters

Returns

Throws

See

Parameters

Throws

See

Parameters

See

Returns

See

Parameters

Returns

See

Parameters

Returns

Parameters